After trading up to the No. 2 overall pick, the Philadelphia Eagles now have seven picks heading into the 2016 NFL Draft. Below is a list of all seven:
| Round | Overall | Pick | How acquired |
| 1 | 2 | Carson Wentz, QB, North Dakota State | Acquired from Browns along with a fourth round pick in 2017 for five draft picks |
| 3 | 79 | Isaac Seumalo, OL, Oregon State | Acquired from Lions for 2015 4th round pick |
| 5 | 153 | Wendell Smallwood, RB, West Virginia | Eagles' own pick |
| 5 | 164 | Halapoulivaati Vaitai, OT, TCU | Acquired from Steelers for Brandon Boykin |
| 6 | 196 | Blake Countess, CB, Auburn | Acquired from Vikings for Eagles' sixth round pick |
| 7 | 233 | Eagles' own pick | |
| 7 | 240 | Acquired from Vikings for Eagles' sixth round pick | |
| 7 | 251 | Acquired from Cardinals for Matt Barkley |
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